Dataset features

Specifications


Application: ChIP-seq analysis
Number of samples: 6
Release date: Nov 10 2014
Last update date: Oct 10 2018
Access: Public
Diseases: Ectromelia, Infectious
Dataset link ETS trancription factors PU.1 and Spi-B binding in mouse lymphoma cells

Experimental Protocol


ChIP-seq analysis for PU.1 and Spi-B was conducted in duplicate, in WEHI-279 mouse lymphoma cells were infected with retroviral vectors encoding 3XFLAG-tagged PU.1 or Spi-B. Immuno-precipitated chromatin was sequenced using Next-generation Illimuna Sequencing conducted independantly at two different sequencing cores. Between-laboratory ChIP-seq datasets were combined using mmCHIP, and ChIP-enriched regions compared and contrasted between the two transcription factors.

Repositories


GEO

GSE58128

ENA

SRP042606

BioProject

PRJNA249085

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Contact


Rodney DeKoter