Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 2
Release date: Dec 1 2013
Last update date: Oct 10 2018
Access: Public
Diseases: Neuroblastoma
Dataset link Gene Expression and Exon Splicing Change Analysis of Mouse N2A Cell Transcriptome upon Polypyrimidine tract-binding protein depletion.

Experimental Protocol


Poly(A)-mRNA and exon profiles of N2A mouse blastoma cells in two samples: shRNA transfection control, single knock down of ptbp1. RNA-seq libraries were generated in strand specific way using dUTP and USER enzyme and sequenced using Illumina HiSeq2000.

Repositories


GEO

GSE45119

ArrayExpress

E-GEOD-45119

ENA

SRP019210

BioProject

PRJNA192958

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Areum Han

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