Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 16
Release date: May 17 2018
Last update date: Nov 29 2018
Access: Public
Diseases: Leukemia, Myeloid, Acute
Genes: CTCF, HOXA7, HOXA9, HOXA13, HOTTIP, FIP2
Dataset link CTCF boundary remodels chromatin domain and drives aberrant HOX gene transcription in acute myeloid leukemia

Experimental Protocol


We have submitted our RAW sequence datasets into SRA database (SRP115103 and Bioproject: PRJNA396046), including RNA-SEQ, ATAC-seq, ChIP-seq and 4C-seq for WT and CBS7/9KO MOLM13 leukemia cells

Repositories


GEO

GSE113191

ENA

SRP140526

BioProject

PRJNA450401

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Contact


Suming Huang