Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 40
Release date: Oct 19 2018
Last update date: Nov 30 2018
Access: Public
Diseases: Glioma
Dataset link A non-canonical BRD9-containing BAF chromatin remodeling complex regulates naïve pluripotency in mouse embryonic stem cells

Experimental Protocol


ChIP-Seq of BRD9, BRG1, ARID1A and BRD4 in v6.5 mouse embryonic stem cells (mESCs), RNA-Seq of control or Brd9 knocked down populations in v6.5 mESCs, RNA-Seq of DMSO or I-BRD9-treated mESCs at 24 or 48 hour timepoints, RNA-Seq of control or ARID1A knockout populations using Arid1af/f:CreERT2 ESCs.

Repositories


GEO

GSE111264

ENA

SRP133677

BioProject

PRJNA436371

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Contact


Diana Hargreaves