Computational protocol: Epigenetic regulation of CDH1 exon 8 alternative splicing in gastric cancer

Similar protocols

Protocol publication

[…] NNSPLICE ( were used to predict splice acceptors and donors around CDH1 exon 8. We used the ESEfinder program ( to identify exonic splicing enhancers (ESEs) []. […]

Pipeline specifications

Software tools NNSplice, ESEfinder
Application WGS analysis
Organisms Homo sapiens
Diseases Neoplasms, Stomach Neoplasms