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AA_stat specifications

Information


Unique identifier OMICS_32442
Name AA_stat
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input format CSV,pepXML
Output data A Gaussian fit report, a summary histogram, some charts of normalized frequencies, a file of amino acid frequencies, a file of p-values and a file which compiles all the results.
Output format PDF+PNG+PNG+SVG+CSV+CSV+HTML
Operating system Unix/Linux
Programming languages Python
Computer skills Medium
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Mikhail V. Gorshkov

Publication for AA_stat

AA_stat citations

 (5)
library_books

Clinical Features, Pathogenesis, and Treatment of Large Granular Lymphocyte Leukemias

2017
PMCID: 5548667
PMID: 28717070
DOI: 10.2169/internalmedicine.56.8881

[…] ency with which T-LGLs and bone marrow failure syndromes coexists suggests an etiological relationship rather than simple coincidence. In a large cohort of 367 patients with MDS and 140 patients with AA (), STAT3-mutated clones could be found, not only in the known LGL-concomitant cases, but also in a small proportion of unsuspected cases (AA, 7%; and MDS, 2.5%). AA patients with STAT3 mutations s […]

library_books

Intercalation and structural aspects of macroRAFT agents into MgAl layered double hydroxides

2016
Beilstein J Nanotechnol
PMCID: 5238628
PMID: 28144548
DOI: 10.3762/bjnano.7.191

[…] y, we reported that highly stable dispersions at elevated macroRAFT copolymer concentrations [] could be obtained by adsorbing statistical copolymers of acrylic acid (AA) and n-butyl acrylate (BA) (P(AA-stat-BA)) of low molar mass (1800 g mol−1) synthesized by RAFT polymerization onto MgAl LDH. In this work, we focus on the possibility to design functional hybrid LDH phases by direct intercalation […]

library_books

STAT3 gene mutations and their association with pure red cell aplasia in large granular lymphocyte leukemia

2014
Cancer Sci
PMCID: 4317942
PMID: 24350896
DOI: 10.1111/cas.12341

[…] st to the situation in Western countries where rheumatoid arthritis and infections due to neutropenia are more frequent in cases of LGL L., In a subset of bone marrow failure syndrome such as MDS and AA, STAT3-mutated T-cell subclones were found, suggesting contributions of STAT3-mutated T cells to immune dysregulation in these disorders. Significant associations of STAT3 SH2 domain mutations and […]

library_books

Characterization of Tat Antibody Responses in Chinese Individuals Infected with HIV 1

2013
PLoS One
PMCID: 3614898
PMID: 23565278
DOI: 10.1371/journal.pone.0060825

[…] The peptide HIV-1 HXB2 Tat 1–21 aa (sTat1–21) was produced using solid-phase synthesis by Temple University (Philadelphia, USA). […]

library_books

STAT1 Is Required for Redifferentiation during Madin Darby Canine Kidney Tubulogenesis

2010
Mol Biol Cell
PMCID: 2982126
PMID: 20861313
DOI: 10.1091/mbc.E10-02-0112

[…] d that were treated or not with 4HT for 48 h. We solubilized the cells and immunoprecipitated with antibodies to Raf-1. We western blotted the immunoprecipitates with antibodies to STAT1. As shown in Aa, STAT1 coimmunoprecipitated with Raf-1; this was not observed in the immunoprecipitate with control immunoglobulin (Ig)G (Ac). The STAT1 signal was stronger in cells expressing CA-STAT1, due to coi […]

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AA_stat institution(s)
Institute for Energy Problems of Chemical Physics, Russian Academy of Sciences, Moscow, Russia; Moscow Institute of Physics and Technology (State University), Dolgoprudny, Russia
AA_stat funding source(s)
Supported by the Russian Foundation for Basic Research, project #16-54-21006.

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