Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 18
Release date: Feb 13 2018
Last update date: Feb 13 2018
Access: Public
Diseases: Bacterial Infections
Chemicals: Amino Acids, Carbon
Computational protocol: TAIR, STAR, DESeq, PlantGSEA, GEO, KEGG
Dataset link Primed primary metabolism in systemic leaves: a functional systems analysis

Experimental Protocol


Transcriptome profiling by RNA-sequencing of 18 systemic leaf samples from Arabidopsis thaliana Col-0 treated with P. syringae or mock.

Repositories


GEO

GSE101839

ENA

SRP113516

BioProject

PRJNA395664

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Contact


Joachim Kopka

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