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aaRNA specifications

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Unique identifier OMICS_05497
Name aaRNA
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Publication for aaRNA

aaRNA citations

 (2)
library_books

ZBP1/DAI ubiquitination and sensing of influenza vRNPs activate programmed cell death

2017
PMCID: 5551577
PMID: 28634194
DOI: 10.1084/jem.20170550

[…] was washed twice with 75% ethanol, air dried, and solubilized in pure water., rna-binding properties of zbp1 were predicted using protein-rna–binding prediction analytical tools bindn, catrapid, and aarna (; ; ). ubpred and ubisite servers were used to predict potential ubiquitination sites in zbp1 (; ). i-tasser server was used to predict full-length zbp1 structure ()., graphpad prism 7.0 […]

library_books

Arid5a regulates naive CD4+ T cell fate through selective stabilization of Stat3 mRNA

2016
PMCID: 4821647
PMID: 27022145
DOI: 10.1084/jem.20151289

[…] () with the amber ff12sb force field (). from the docking results, we picked the top 100 clusters and investigated these manually. here, we used residue-level rna binding propensity from the program aarna () and the dna-binding mode of mrf2 to identify putative rna binding residues., student’s t test (two tailed) was used to analyze data for statistically significant differences. values of p […]


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aaRNA institution(s)
Laboratory of Systems Immunology, WPI Immunology Frontier Research Center, Osaka University, Osaka, Japan

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