Dataset features

Specifications


Application: RNA-seq analysis, sRNA-seq analysis
Number of samples: 1
Release date: Apr 1 2014
Last update date: Jul 20 2018
Access: Public
Genes: RAG2, VMA5, NXT, BCNT, TCF3, ETS1
Dataset link Transcriptional landscape of Rag2 -/- thymocytes [ShortRNA-Seq]

Experimental Protocol


Genome-wide analysis via ChIP-Seq for Ets1, Runx1, total RNA Pol II binding, H3K4me1, H3K4me2, H3K4me3, H3K27me3, H3K36me3, short RNA-Seq, Mnase-Seq in murine Rag2 -/- thymocytes, ChIP-Seq for E47, Mnase-Seq and gene expression microarray analysis in DP thymocytes This Series represents ShortRNA-Seq data.

Repositories


GEO

GSE56358

ArrayExpress

E-GEOD-56358

ENA

SRP040728

BioProject

PRJNA243034

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Contact


Pierre Cauchy
Pierre Daniel Cauchy

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