ABMapper specifications

Information


Unique identifier OMICS_01238
Name ABMapper
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Some reads.
Input format BWA,SAM,FASTA,FASTQ
Output data The alignment details, junction sites, putative locations of repetitive reads.
Operating system Unix/Linux, Mac OS, Windows
Programming languages C++, Perl
Computer skills Advanced
Stability No
Maintained No

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Publication for ABMapper

ABMapper institution(s)
Hong Kong Bioinformatics Centre, The Chinese University of Hong Kong, Shati, China; School of Life Sciences, The Chinese University of Hong Kong, Shati, China; Department of Computer Science and Engineering, The Chinese University of Hong Kong, Shati, China; School of Biomedical Sciences, The Chinese University of Hong Kong, Shati, China
ABMapper funding source(s)
Supported by a Focused Investment Scheme of the Chinese University of Hong Kong; and a General Research Fund (GRF461708) from the Research Grant Committee, Hong Kong SAR Government.

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