ABruijn assembler specifications


Unique identifier OMICS_11499
Name ABruijn assembler
Alternative name Flye
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input format FASTA
Biological technology Pacific Biosciences, Oxford Nanopore
Operating system Unix/Linux
Programming languages C, C++, Javascript, Python
License BSD 3-clause “New” or “Revised” License
Computer skills Advanced
Version 2.3.1
Stability Beta
Requirements Blasr aligner
Maintained Yes


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  • person_outline Mikhail Kolmogorov <>

Publications for ABruijn assembler

ABruijn assembler institution(s)
Department of Computer Science and Engineering, University of California, San Diego, CA, USA; Graduate Program in Bioinformatics and Systems Biology, University of California, San Diego, CA, USA; Research School of Computer Science, Australian National University, Canberra, ACT, Australia

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