AbScan specifications

Information


Unique identifier OMICS_20341
Name AbScan
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
Stability Stable
Maintained Yes

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Versioning


No version available

Maintainer


  • person_outline Vineet Bafna

Publication for AbScan

AbScan citation

library_books

ABS–Scan: In silico alanine scanning mutagenesis for binding site residues in protein–ligand complex

2014
F1000Res
PMCID: 4319546
PMID: 25685322
DOI: 10.5256/f1000research.5509.r6262

[…] The detailed results of ∆∆G scores obtained for each of the mutation produced at the binding site for both these datasets can be accessed from the web-resource - http://proline.biochem.iisc.ernet.in/abscan/validation.A suitable dataset for validation would be one that reports binding affinities for both wild-type and mutant proteins with same ligand, performed in a uniform experimental environmen […]

AbScan institution(s)
Electrical and Computer Engineering, University of California, San Diego, La Jolla, CA, USA; Digital Proteomics, LLC, La Jolla, CA, USA; Computer Science and Engineering, University of California, San Diego, La Jolla, CA, USA
AbScan funding source(s)
Supported by a grant from the NIH (P41RR24851, 1R01GM114362); and by a grant from the NIH (5P41GM103484- 07).

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