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AbSim specifications


Unique identifier OMICS_20795
Name AbSim
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 2.0
Computer skills Advanced
Version 0.2.6
Stability Stable
rmarkdown, knitr, R(≥3.1.0), ape, poweRlaw
Maintained Yes


No version available



  • person_outline Alexander Yermanos <>

Publication for AbSim

AbSim citation


Intelligibility Evaluation of Pathological Speech through Multigranularity Feature Extraction and Optimization

PMCID: 5282458
PMID: 28194222
DOI: 10.1155/2017/2431573

[…] by sample data r 1, r 2,…, r i,…, r m, m polygon (r i, r i+1,…, r i+m−1) is composed of arbitrary continuous adjacent m-dimensional variables, and the center of m polygon by geometric algebra is(13)absim=∑j=1mri+j−1cos⁡j−1∗w32+∑j=2mri+j−1sin⁡j−1∗w32,angleim=arctan⁡∑j=2mri+j−1sin⁡j−1∗w/32∑j=1mri+j−1cos⁡j−1∗w/32+2πi−1m,where w = 2π/m is the angle of the adjacent features, absim is the amplitude […]

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AbSim institution(s)
Department of Biosystems Science and Engineering, ETH Zürich, Basel, Switzerland; Institute of Microbiology, ETH Zürich, Zürich, Switzerland; Department of Chemistry and Applied Biosciences, ETH Zürich, Zürich, Switzerland
AbSim funding source(s)
Supported by SystemsX.ch AntibodyX RTD project, Swiss National Science Foundation (Project no: 31003A_143869, 31003A_170110), and Swiss Vaccine Research Institute.

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