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ABySS-Explorer | Visualizing genome sequence assemblies

An interactive Java application that employs a novel graph-based representation to display a sequence assembly and associated meta data. The tool was designed with the ABySS sequence assembler in mind and was motivated by the need to examine assembly structure, in particular contig connectivity and supporting paired-end read relationships.

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ABySS-Explorer forum

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ABySS-Explorer classification

ABySS-Explorer specifications

Unique identifier:
OMICS_00873
Interface:
Graphical user interface
Operating system:
Unix/Linux
Version:
1.3.4
Maintained:
Yes
Software type:
Package/Module
Restrictions to use:
None
Computer skills:
Medium
Stability:
Stable

ABySS-Explorer distribution

versioning

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No versioning.

ABySS-Explorer support

Documentation

Credits

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Publications

Institution(s)

BC Cancer Agency, Genome Sciences Centre

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