Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 180
Release date: Mar 29 2017
Last update date: Mar 31 2017
Access: Public
Taxon: Apis mellifera
Dataset link Transcriptomic and epigenetic responses to social challenge and their association with future behavior in honey bees (RNA-Seq)

Experimental Protocol


There are a total of 180 samples equally balanced between 3 factors: 90 challenge (X) and 90 control (C); 60 30m, 60 60m, and 60 120m; 60 colony R02, 60 colony R03, and 60 colony R21. The control and experimental samples are paired. We excluded a total of 26 samples with a proportion of reads mapping to the Deformed Wing Virus (DWV) genome of ≥ 0.005.

Repositories


GEO

GSE85876

ENA

SRP082457

BioProject

PRJNA339620

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Contact


Michael Saul