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ACBD specifications

Information


Unique identifier OMICS_22125
Name ACBD
Alternative name Ascidians Chemical Biological Database
Restrictions to use None
Community driven No
Data access Browse
User data submission Not allowed
Maintained No

ACBD citations

 (12)
library_books

Negative charge and membrane tethered viral 3B cooperate to recruit viral RNA dependent RNA polymerase 3Dpol

2017
Sci Rep
PMCID: 5725453
PMID: 29230036
DOI: 10.1038/s41598-017-17621-6

[…] In order to faciliate the recruitment of ACBD3 to model membranes, we engineered a biomimetic recombinant 3A viral protein. The 3A protein is myristoylated at the N-terminal glycine residue and also contains a hydrophobic region that every a […]

library_books

Development of hop transcriptome to support research into host viroid interactions

2017
PLoS One
PMCID: 5590963
PMID: 28886174
DOI: 10.1371/journal.pone.0184528

[…] id infected plants (<1.5 FC).The next group of seven targets, cold-regulated 413-plasma membrane protein 2 (COR413PM2), GATA transcription factor (GATA), acyl-CoA-binding domain-containing protein 5 (ACBD5), multiprotein-bridging factor 1c (MBF1c), putative polyprotein (Ppol) and two uncharacterized proteins (UP1 and UP2) (, , ) were selected based on CBCVd-derived sRNAs, which were characterized […]

library_books

Age related changes in the transcriptome of antibody secreting cells

2016
Oncotarget
PMCID: 4924646
PMID: 26967249
DOI: 10.18632/oncotarget.7958

[…] eroxisomes, which are involved in fatty acid metabolism and reduction of ROS. These included VCP, (1.61) involved in assembly of peroxisome [], PPARβ/δ (1.24), a regulator of energy metabolism [] and ACBD5 (1.27), a peroxisome receptor for acyl-CoA-esters [].Functional analysis by DAVID showed significant differences in expression levels for the endoplasmic reticulum with most genes having higher […]

call_split

Involvement of the Acyl CoA binding domain containing 7 in the control of food intake and energy expenditure in mice

2016
eLife
PMCID: 4821795
PMID: 26880548
DOI: 10.7554/eLife.11742.036
call_split See protocol

[…] Analysis of amino acid conservation between mouse DBI/ACBP and ACBD7 was performed using the DIALIGN software (http://bibiserv.techfak.uni-bielefeld.de/dialign/) and using the ACBD7 described sequence available from the NCBI (http://www.ncbi.nlm.nih.gov/protein/N […]

library_books

Genome wide identification and Phylogenic analysis of kelch motif containing ACBP in Brassica napus

2015
BMC Genomics
PMCID: 4497377
PMID: 26156054
DOI: 10.1186/s12864-015-1735-6

[…] Conserved domain in AtACBPs and BnACBPs were analyzed through batch CD-search of NCBI. ACBPs common domain structure was the acyl-coA binding domain (ACBD), which allowed them to fulfill their roles in binding acyl-coA esters with very high affinity [–]. BnACBPs structure conserved this ACBD but locations were different, as in AtACBPs. Moreover, in […]

library_books

Computational Prediction of acyl coA Binding Proteins Structure in Brassica napus

2015
PLoS One
PMCID: 4465970
PMID: 26065422
DOI: 10.1371/journal.pone.0129650

[…] , heavy metal accumulation response [], abscisic acid (ABA) signaling treatment [, ], steam cuticle formation [], Pb (II) accumulation in roots [], and drought tolerance []. In the current study, the ACBD in kelch motif BnACBPs were located on positions 14 to 104 or 21 to 105 in BnACBP4 and 26 to 104 in BnACBP5. In our previous study, using NCBI Batch CD-search, these ACBD were predicted to be loc […]


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ACBD institution(s)
Department. of Biosciences. and Informatics, Faculty of Sciences. and Technology., Keio University, Tokyo, Japan
ACBD funding source(s)
Supported by Institute for Bioinformatics Research and Development (BIRD), Japan Sciences and Technology Agency (JST).

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