AcCNET specifications

Information


Unique identifier OMICS_13204
Name AcCNET
Alternative name Accessory Genome Constellation Network
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Input data Proteome
Input format FASTA
Output data A network, information of the network nodes, annotation of the representative sequence of each homologous protein clusters
Output format CSV, FASTA
Operating system Unix/Linux
Programming languages Perl
License GNU General Public License version 3.0
Computer skills Medium
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Val Lanza <>

Publication for Accessory Genome Constellation Network

AcCNET institution(s)
Department of Microbiology, Ramón y Cajal University Hospital, Ramón y Cajal Health Research Institute (IRYCIS), Madrid, Spain; Join Unit of Antibiotic Resistance and Bacterial Virulence associated with the Spanish National Research Council (CSIC), Madrid, Spain; CIBER in Epidemiology and Public Health (CIBER-ESP), Madrid, Spain; Departamento de Biología Molecular, Universidad de Cantabria and Instituto de Biomedicina y Biotecnología de Cantabria IBBTEC (UC- CSIC), Santander, Spain
AcCNET funding source(s)
This work was supported by the European Commission, Seven Framework Program (EVOTARFP7-HEALTH-282004 and PLASWIRES-612146/FP7-ICT-2013-10). Authors also acknowledge the European Development Regional Fund “A way to achieve Europe” (ERDF) for cofounding the Plan Nacional de I+D+ I 2012-2015 (PI12-01581 and BFU2014-55534-C2-1) and CIBER actions (CIBER in Epidemiology and Public Health, CIBERESP; CB06/02/0053), and the Regional Goverment of Madrid (PROMPT-S2010/BMD2414).

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