aCGH and SNP microarray data analysis bioinformatics software tools

Array comparative genomic hybridization (aCGH; Pinkel et al., 1998) and single nucleotide polymorphism (SNP) microarray (Mei et al., 2000) are array-based karyotyping techniques which can help determine the genome abnormalities causing genetic disorders and the acquired genome…

aCGH and SNP array analysis steps

aCGH and SNP array analysis workflow

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aCGH and SNP array analysis workflow schema

aCGH and SNP microarray data analysis bioinformatics software tools

Most Recent Tools

RGCCA
Desktop

RGCCA Regularized and Sparse Generalized Canonical Correlation Analysis

Permits the analysis of several sets of variables (blocks) observed on the same…

Permits the analysis of several sets of variables (blocks) observed on the same group of individuals. RGCCA is a multiblock data analysis that extracts the information which is shared by the J-blocks…

Clusternomics
Desktop

Clusternomics

Identifies groups of samples across heterogeneous datasets. The Clusternomics…

Identifies groups of samples across heterogeneous datasets. The Clusternomics algorithm uses probabilistic modelling to identify the groups and share information across the local and global levels.…

PFA
Desktop

PFA Pattern fusion analysis

Aligns local sample-patterns derived from each data type into a global…

Aligns local sample-patterns derived from each data type into a global sample-pattern to characterize phenotypes. PFA is a computational framework and a data-driven integration approach. Firstly, it…

iClusterPlus
Desktop

iClusterPlus

Patterns discovery and cancer gene identification in integrated cancer genomic…

Patterns discovery and cancer gene identification in integrated cancer genomic data. iClusterPlus is a Bioconductor package that offers an integrative clustering of multiple genomic data using a…

Most Popular Tools

ASCAT
Desktop

ASCAT

A tool for accurate dissection of genome-wide allele-specific copy number in…

A tool for accurate dissection of genome-wide allele-specific copy number in tumors.

Genedata…
Desktop

Genedata Expressionist

A comprehensive, enterprise software solution that manages, analyzes, and…

A comprehensive, enterprise software solution that manages, analyzes, and visualizes massive amounts of raw data from next-generation sequencing, microarray and other genomic technologies.

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