aCGH and SNP microarray data analysis bioinformatics software tools

aCGH and SNP array analysis steps

aCGH and SNP array analysis workflow

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aCGH and SNP array analysis workflow schema
Array comparative genomic hybridization (aCGH; Pinkel et al., 1998) and single nucleotide polymorphism (SNP) microarray (Mei et al., 2000) are array-based karyotyping techniques which can help determine the genome abnormalities causing genetic…

aCGH and SNP microarray data analysis bioinformatics software tools

Most Recent Tools

SplitThreader
Desktop
Web

SplitThreader

Allows to analyse and visualize genomic rearrangements and copy number…

Allows to analyse and visualize genomic rearrangements and copy number variation (CNV) in cancer genomes. SplitThreader constructs a sequence graph of genomic rearrangements in the sample and uses a…

CINdex
Desktop

CINdex

Addresses important area of high-throughput genomic analysis. The CINdex…

Addresses important area of high-throughput genomic analysis. The CINdex package allows the automated processing and analysis of the experimental DNA copy number data generated by Affymetrix SNP 6.0…

gsrc
Desktop

gsrc genome structure rearrangement calling

Detects genome structure rearrangements from genotyping data in allopolyploid…

Detects genome structure rearrangements from genotyping data in allopolyploid species including exchanges between subgenomes. GSRC is a pipeline to read and analyze raw single nucleotide polymorphism…

MIMAS
Desktop

MIMAS Multiomics Information Management and Annotation System

Facilitates and accelerates annotation of high-throughput expression profiling…

Facilitates and accelerates annotation of high-throughput expression profiling experiments. MIMAS provides life scientists with a highly flexible and focused GeneChip data storage and annotation…

Most Popular Tools

ASCAT
Desktop

ASCAT

A tool for accurate dissection of genome-wide allele-specific copy number in…

A tool for accurate dissection of genome-wide allele-specific copy number in tumors.

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