ActMiR specifications

Information


Unique identifier OMICS_09924
Name ActMiR
Alternative name activity of miRNAs
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Jun Zhu <>

Publication for activity of miRNAs

ActMiR in publications

 (2)
PMCID: 5698490
PMID: 29162888
DOI: 10.1038/s41598-017-16226-3

[…] (mirnas) are small regulatory non-coding rnas with a diversity of cellular functions, and are frequently dysregulated in cancer. using a novel computational method (actmir) that we recently developed, the “activity” of mirna hsa-mir-500a was implicated in estrogen receptor (er) positive breast cancer; however its targets and functional impact remain poorly […]

PMCID: 5012434
PMID: 27625573
DOI: 10.4137/CIN.S39458

[…] transcription factors (tfs) and genes, and tfs and microrna was constructed to identify key regulators that contribute to hepatocellular carcinoma metastasis. lee et al. developed software called actmir to infer mirna-mediated regulatory networks and the activity of micrornas that could be as potential prognostic biomarkers of cancers based on expression data of micrornas and their predicted […]


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ActMiR institution(s)
Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA
ActMiR funding source(s)
The work was partially supported by the National Institute of Health (CA163772, AG046170, CA172460, and HG008451).

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