ADaCGH protocols

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description
ADaCGH computational protocol

ADaCGH specifications

Information


Unique identifier OMICS_00700
Name ADaCGH
Alternative name Analysis of Data from aCGH
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 2.0
Computer skills Advanced
Version 2.0
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Ramón Diaz-Uriarte <>

Information


Unique identifier OMICS_00700
Name ADaCGH
Alternative name Analysis of Data from aCGH
Interface Web user interface
Restrictions to use None
Programming languages R
Computer skills Basic
Version 2.0
Stability Stable
Maintained Yes

Maintainer


  • person_outline Ramón Diaz-Uriarte <>

Publications for Analysis of Data from aCGH

ADaCGH IN pipeline

2012
PMCID: 3257270
PMID: 22253580
DOI: 10.1371/journal.pcbi.1002286

[…] array-cgh data. the standard method for the analysis of the array-cgh data set measured on a nimblegen tiling array is the segmnt algorithm [21]. additionally, all eight methods provided by the adacgh webserver [43] including the best performing methods of two in-depth comparison studies [39], [40] were applied to the arabidopsis array-cgh data set. from these eight methods, only ace [33], […]

ADaCGH institution(s)
Department of Biochemistry, Universidad Autónoma de Madrid, Instituto de Investigaciones Biomédicas ‘Alberto Sols’ (UAM-CSIC), Madrid, Spain

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