ADAGE specifications

Information


Unique identifier OMICS_11798
Name ADAGE
Alternative names Analysis using Denoising Autoencoders for Gene Expression, eADAGE, ADAGEpath
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License BSD 3-clause “New” or “Revised” License
Computer skills Advanced
Version 0.1.0
Stability Stable
Maintained Yes

Download


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Versioning


No version available

Documentation


Maintainers


  • person_outline Jie Tan
  • person_outline Casey Greene

Additional information


A https://github.com/greenelab/adage

Information


Unique identifier OMICS_11798
Name ADAGE
Alternative names Analysis using Denoising Autoencoders for Gene Expression, eADAGE, ADAGEpath
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Documentation


Maintainers


  • person_outline Jie Tan
  • person_outline Casey Greene

Additional information


A https://github.com/greenelab/adage

Publications for Analysis using Denoising Autoencoders for Gene Expression

ADAGE citation

library_books

Capacity Development through the US President’s Malaria Initiative–Supported Antimalarial Resistance Monitoring in Africa Network

2017
PMCID: 5711327
PMID: 29155671
DOI: 10.3201/eid2313.170366

[…] miologists and public health professionals who provide advice on integrating the newly acquired knowledge and skills to benefit their country’s national malaria control program.Much as in the medical adage “see one, do one, teach one,” PMI envisions its support of training at CDC as the first step in the knowledge transfer process. The PARMA Network’s experience with its first partner, the Departm […]

ADAGE institution(s)
Department of Molecular and Systems Biology, Geisel School of Medicine at Dartmouth, Hanover, NH, USA; Department of Systems Pharmacology and Translational Therapeutics, University of Pennsylvania, Philadelphia, PA, USA; Department of Microbiology and Immunology, Geisel School of Medicine at Dartmouth, Hanover, NH, USA
ADAGE funding source(s)
Supported in part by a grant from the Gordon and Betty Moore Foundation (GBMF 4552), a grant from the Cystic Fibrosis Foundation (STANTO15R0), and a grant from the National Institutes of Health (NIH) grant R01-AI091702.

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