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|Alternative name||Assignment-directed Data collection Algorithm utilizing a Probabilistic Toolkit in NMR|
|Interface||Command line interface|
|Restrictions to use||None|
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Publication for Assignment-directed Data collection Algorithm utilizing a Probabilistic Toolkit in NMR
Mechanism of Histone H3K4me3 Recognition by the Plant Homeodomain of Inhibitor of Growth 3*
[…] onance assignments, 1 mm of the 15N,13C double-labeled ING3 PHD finger was prepared in buffer containing 20 mm Tris-HCl, pH 6.8, 150 mm NaCl, 10 mm DTT, and 10% D2O. The Agilent version of ADAPT-NMR (Assignment-directed Data collection Algorithm utilizing a Probabilistic Toolkit in NMR) was used to optimize simultaneous fast data collection and fully automated NMR backbone assignments. In addition […]
NMRFAM SDF: a protein structure determination framework
[…] NMRFAM-SDF provides three choices for through-bond experiments: (a) ADAPT-NMR, which uses a non-uniform sampling approach by collecting 3D spectra as tilted 2D planes; (b) non-uniform sampling with iterative soft thresholding ([email protected]) (Hyberts et al. ) with two optio […]
Robust, Integrated Computational Control of NMR Experiments to Achieve Optimal Assignment by ADAPT NMR
[…] ADAPT-NMR consists of more than 60,000 lines of MATLAB code, shell scripts, and the Varian (Bruker) macro languages. The MATLAB code includes all steps described in the algorithm section except for sp […]
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