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ADFS specifications

Information


Unique identifier OMICS_20588
Name ADFS
Alternative name Allergen Database for Food Safety
Restrictions to use None
Community driven No
Data access Browse
User data submission Not allowed
Maintained No

Maintainers


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Additional information


http://allergen.nihs.go.jp/ADFS/index.jsp?pagen=faq

Publications for Allergen Database for Food Safety

ADFS citations

 (6)
library_books

Antibiotic drug usage in pigs in Germany—Are the class profiles changing?

2017
PLoS One
PMCID: 5571922
PMID: 28841685
DOI: 10.1371/journal.pone.0182661

[…] rm size . [, ]. The information needed to calculate the number of used daily doses (nUDD = number of days treated × number of active substances applied × number of animals treated) is included in the ADFs directly, so the number of used daily dose does not need to be estimated with an average animal weight or other surrogates. The population size is defined as the average number of housed animals […]

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The Infection of Cucumber (Cucumis sativus L.) Roots by Meloidogyne incognita Alters the Expression of Actin Depolymerizing Factor (ADF) Genes, Particularly in Association with Giant Cell Formation

2016
Front Plant Sci
PMCID: 5025442
PMID: 27695469
DOI: 10.3389/fpls.2016.01393
call_split See protocol

[…] ana ADF protein sequences against the Cucumber Genome Database (http://cucumber.genomics.org.cn/page/cucumber/index.jsp). Those with the highest amino acid percentage identity were selected. Cucumber ADFs were named according to the annotation of the Cucumber Genome Database. The multiple sequence alignment of CsGID1s and related CsGID1 proteins was performed using ClustalW within the MEGA5 softwa […]

library_books

TaADF3, an Actin Depolymerizing Factor, Negatively Modulates Wheat Resistance Against Puccinia striiformis

2016
Front Plant Sci
PMCID: 4716666
PMID: 26834758
DOI: 10.3389/fpls.2015.01214

[…] ames of the three copies (Figure ).The deduced TaADF3 protein encoded 138 amino acid residues with a molecular weight of 16.10 kDa and an isoelectric point (PI) of 5.65. Multi-alignment of TaADF3 and ADFs from other higher plants revealed a preserved Ser6 in plant ADFs (Ser3 in animal) that could be phosphorylated. TaADF3 contained a bipartite NLS—Lys22 and Arg28 close to the amino terminus; Ser6, […]

library_books

Loss of Cofilin 1 Disturbs Actin Dynamics, Adhesion between Enveloping and Deep Cell Layers and Cell Movements during Gastrulation in Zebrafish

2010
PLoS One
PMCID: 3008747
PMID: 21203473
DOI: 10.1371/journal.pone.0015331

[…] and nematode (56%) (). It was most similar to Cfl1 of medaka with 90% similarity. As shown in the phylogenetic tree (), zebrafish Cfl1 was grouped together with the chordates, while the invertebrate ADFs (fly and nematode) were placed in an out-group cluster.To determine the chromosomal position of cfl1, we conducted a syntenic analysis of three cofilin genes (). The cfl1 in zebrafish, human, and […]

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Population Genetic Analysis of Propionibacterium acnes Identifies a Subpopulation and Epidemic Clones Associated with Acne

2010
PLoS One
PMCID: 2924382
PMID: 20808860
DOI: 10.1371/journal.pone.0012277
call_split See protocol

[…] ung von Mikroorganismen und Zellkulturen Catalogue) and SK137 as isolated from human skin. In addition, the non-closed genomes of strains SK187 (NZ_ADJM00000000), J165 (NZ_ADJL00000000), and J139 (NZ_ADFS00000000) were included in the analysis. The four latter genomes serve as reference for the Human Microbiome Project. The two complete genomes were aligned using MAUVE and ClustalX. To identify s […]

library_books

Computational detection of allergenic proteins attains a new level of accuracy with in silico variable length peptide extraction and machine learning

2006
Nucleic Acids Res
PMCID: 1540723
PMID: 16977698
DOI: 10.1093/nar/gkl467

[…] uences according to the FAO/WHO in silico protocol alone or as part of several interrogation formats: AllerPredict, (), Structural Database of Allergenic Proteins (SDAP) (), (), AllerMatch (), () and Allergen Database for Food Safety (ADFS) (), ().Various additional bioinformatics testing procedures founded on inter-allergen similarity have been published, such as those relying on the FASTA algori […]

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ADFS institution(s)
Division of Biochemistry of the National Institute of Health Sciences, located in Tokyo, Japan
ADFS funding source(s)
Supported by a grant from the Ministry of Health, Labor and Welfare.

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