admixturegraph statistics

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admixturegraph specifications

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Unique identifier OMICS_17019
Name admixturegraph
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Stability Stable
Maintained Yes

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  • person_outline Thomas Mailund <>

Publication for admixturegraph

admixturegraph in publications

 (4)
PMCID: 5520058
PMID: 28719574
DOI: 10.1038/ncomms16082

[…] an admixture event involving the ancestors of modern european and southeast asian dogs (), with ∼19–30% gene flow from the latter into hxh and ngd, as estimated by an f4-ratio test (). analysis with admixturegraph on the whole-genome data, a method related to mixmapper that examines a manually defined demographic history, demonstrated a perfect fit for the observed f-statistics under this model […]

PMCID: 5400393
PMID: 28074030
DOI: 10.1093/molbev/msw293

[…] a system of equations (which are linear in terms of branch lengths) for a linearly independent set of f-statistics (e.g., all pairwise f2 values)., the results presented here are obtained via the admixturegraph software (). admixturegraph takes as input a user-defined admixture graph topology and solves for the best-fitting branch lengths and mixture proportions given the observed […]

PMCID: 4982469
PMID: 26196601
DOI: 10.1038/nature14895

[…] the suruí-specific ancestry component is genetically closer to the andamanese onge than to tongans from polynesia (d = 0.0094, z = 3.4)., to investigate models consistent with the data, we used the admixturegraph software to fit admixture graphs relating the ancestry of native american groups to han chinese and onge andaman islanders, incorporating a previously described admixture event […]

PMCID: 4170574
PMID: 25230663
DOI: 10.1038/nature13673

[…] test; loschbour, chimp) statistics obtained when test is near eastern () imply that the eef had some whg-related ancestry, which was greater than 0% and as high as 45% (si13)., we used the admixturegraph software, to fit a model (a tree structure augmented by admixture events) to the data, exploring models relating the three ancient populations (stuttgart, loschbour, and ma1) to two […]


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admixturegraph institution(s)
Bioinformatics Research Centre, Aarhus University, Aarhus, Denmark
admixturegraph funding source(s)
The research was funded by the Danish Council for Independent Research, Sapere Aude grant 12-125062.

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