Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 16
Release date: Dec 31 2016
Last update date: Jan 1 2017
Access: Public
Diseases: Malaria, Neoplasms, Second Primary
Dataset link PfAP2-I-GFP-msp5MUT vs PfAP2-I-GFP 3D7 [timecourse 1]

Experimental Protocol


Plasmodium falciparum strains AP2-I-GFP and AP2-I-GFP were highly synchronized and two parallel timecourses resulting in a total of 8 samples (4 wildtype PfAP2-I-GFP, 4 msp5 mutant) were hybridized against a Cy3-labeled reference pool of 3D7 mixed stage parasites on a two-color array. Starting at 18 hours post-invasion, samples were harvested in Trizol for total RNA extraction every 6 hours until 36h post-invasion and then every 3h until the end of the IDC (48h post-invasion).

Repositories


GEO

GSE77807

BioProject

PRJNA311602

Download


Contact


Manuel Llinas