aFC specifications

Information


Unique identifier OMICS_23423
Name aFC
Alternative name allelic Fold Change
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input data A list of QTL.
Input format FASTQTL
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
Version 0.2
Stability Stable
Requirements
vcf, pheno, qtl, geno, chr, log_xform
Maintained Yes

Download


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Versioning


No version available

Maintainers


  • person_outline Pejman Mohammadi
  • person_outline Tuuli Lappalainen

Publication for allelic Fold Change

aFC institution(s)
New York Genome Center, New York, NY, USA; Department of Systems Biology, Columbia University, New York, NY, USA; Department of Genetic Medicine and Development, University of Geneva Medical School, Geneva, Switzerland; Institute for Genetics and Genomics in Geneva (iGE3), University of Geneva, Geneva, Switzerland; Swiss Institute of Bioinformatics, Geneva, Switzerland
aFC funding source(s)
Supported by the Common Fund of the Office of the Director of the National Institutes of Health (NIH); by the NCI, NHGRI, NHLBI, NIDA, NIMH, and NINDS; by a contract (HHSN268201000 029C); by an SAIC-F subcontract (10ST1035); by SAIC-F (HHSN261200800001E); by University of Miami grants DA006227 and DA033684 and to contract N01MH000028; by the University of Geneva (MH090941 and MH101814), the University of Chicago (MH090951, MH090937, MH101820, MH101825), the University of North Carolina–Chapel Hill (MH090936 and MH101819), Harvard University (MH090948), Stanford University (MH101782), Washington University St Louis (MH101810), and the University of Pennsylvania (MH101822).

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