AGPS specifications


Unique identifier OMICS_24037
Alternative name Annotating Genes with Positive Samples
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes



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  • person_outline Luonan Chen <>
  • person_outline Yong Wang <>
  • person_outline Kazuyuki Aihara <>

Publication for Annotating Genes with Positive Samples

AGPS in publication

PMCID: 3221619
PMID: 22024468
DOI: 10.1186/2043-9113-1-28

[…] aligner (nmnaligner), detecting drug targets in metabolic networks by integer linear programming (nmetailp), protein structure alignment tool based on multiple objective optimization (nsamo), annotating genes with positive samples (nagps), parsimonious tree-grow method for haplotype inference (nptg), identifying differentially expressed pathways via a mixed integer linear programming […]

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AGPS institution(s)
ERATO Aihara Complexity Modelling Project, JST, Tokyo, Japan; Intelligent Computing Lab, Hefei Institute of Intelligent Machines, Chinese Academy of Sciences, Hefei, China; Institute of Industrial Science, The University of Tokyo, Tokyo, Japan; Department of Electrical Engineering and Electronics, Osaka Sangyo University, Osaka, Japan; Institute of system biology, Shanghai University, Shanghai, China
AGPS funding source(s)
Supported by the National High Technology Research and Development Program of China (2006AA02Z309).

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