albacore specifications

Information


Unique identifier OMICS_20597
Name albacore
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Biological technology Oxford Nanopore
Operating system Unix/Linux
Programming languages C++
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Maintained Yes

Download


download.png
docker.png

Versioning


No version available

Documentation


Additional information


Albacore C++ version is also available through the ONT Developer Channel to users who have signed the Developer terms and conditions.

albacore citation

library_books

Real time DNA barcoding in a rainforest using nanopore sequencing: opportunities for rapid biodiversity assessments and local capacity building

2018
GigaScience
PMCID: 5905381
PMID: 29617771
DOI: 10.1093/gigascience/giy033

[…] lind snake), and combinations of barcoded samples through multiplexing (for the eyelash palm pitviper and gecko 1).Initially, this second sequencing run appeared to perform well. However, after using Albacore to demultiplex the reads, we determined the adapter ligation enzyme likely degraded because the output primarily consisted of adapter sequences (, ). Nevertheless, we were able to generate co […]

albacore reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review albacore