ALFRED-G pipeline

ALFRED-G specifications

Information


Unique identifier OMICS_19116
Name ALFRED-G
Alternative name ALFRED
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input data A set of n sequences.
Input format FASTA
Output data An n x n matrix of distance estimate for use in Phylogenetic inference.
Operating system Unix/Linux, Mac OS
Programming languages C++, Perl
Computer skills Advanced
Stability Stable
Requirements A modern C++ ready compiler, cmake, Git
Maintained Yes

Versioning


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Maintainer


  • person_outline Srinivas Aluru <>

Publications for ALFRED-G

ALFRED-G institution(s)
Department of Computer Science, University of Central Florida, Orlando FL, USA; Institute for Data Engineering and Science, Georgia Institute of Technology, Atlanta, GA, USA; School of Computational Science and Engineering, Georgia Institute of Technology, Atlanta, GA, USA; School of Electrical Engineering and Computer Science, Louisiana State University, Baton Rouge, LA, USA
ALFRED-G funding source(s)
Supported by the U.S. National Science Foundation grant IIS-1416259 and the U.S. National Science Foundation grant IIS-1416259.

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