AlgPred statistics

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Citations per year

Number of citations per year for the bioinformatics software tool AlgPred
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Tool usage distribution map

This map represents all the scientific publications referring to AlgPred per scientific context
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Associated diseases

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Popular tool citations

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Protocols

AlgPred specifications

Information


Unique identifier OMICS_06624
Name AlgPred
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Taxon


  • Primates
    • Homo sapiens

Publication for AlgPred

AlgPred citations

 (19)
call_split

Immune Informatic Analysis and Design of Peptide Vaccine From Multi epitopes Against Corynebacterium pseudotuberculosis

2018
Bioinform Biol Insights
PMCID: 5954444
PMID: 29780242
DOI: 10.1177/1177932218755337
call_split See protocol

[…] To analyze allergenic of the selected targets, software AlgPred (http://www.imtech.res.in/raghava/algpred/index.html) was used. The server executes prediction based on 6 different approaches. Combinations of the 6 approaches can be used to predict the alle […]

library_books

Computational identification, characterization and validation of potential antigenic peptide vaccines from hrHPVs E6 proteins using immunoinformatics and computational systems biology approaches

2018
PLoS One
PMCID: 5929558
PMID: 29715318
DOI: 10.1371/journal.pone.0196484

[…] In order to validate the non-allergenic potential of the predicted B-cell and T-cell epitopes an online web tool AlgPred [] (http://crdd.osdd.net/raghava/algpred/) was utilized by using multiple algorithms (SVMc, IgEepitope, ARPs BLAST and MAST) to predict the allergenic peptides with an accuracy of 85% by combi […]

library_books

Designing and overproducing a tandem epitope of gp350/220 that shows a potential to become an EBV vaccine

2018
PMCID: 5857718
PMID: 29560474
DOI: 10.1016/j.heliyon.2018.e00564

[…] crease in antigenicity. In addition, the tandem epitope was analyzed for its potential to elicit an allergic immune response. In predicting whether the tandem epitope was a potential allergen we used AlgPred software, which can be used to predict allergenic proteins and also map IgE epitopes . […]

library_books

In silico Design, and In vitro Expression of a Fusion Protein Encoding Brucella abortus L7/L12 and SOmp2b Antigens

2018
PMCID: 5840964
PMID: 29531919
DOI: 10.4103/abr.abr_10_17

[…] n recommendations, prediction of the potential allergenicity of therapeutic protein is realized as a significant parameter in vaccine development by.[] Prediction of allergenicity of L7/L12-SOmp2b by AlgPred indicated that the construct is not an allergen.Since Th1 response mediated by MHC-II epitopes are indicated to be the significant key in defense against Brucella infection, the potential of t […]

library_books

Identification and Antithrombotic Activity of Peptides from Blue Mussel (Mytilus edulis) Protein

2018
Int J Mol Sci
PMCID: 5796087
PMID: 29300301
DOI: 10.3390/ijms19010138

[…] The potential character of the identified peptides from E1–E3 samples was analyzed using ToxinPred (http://www.imtech.res.in/raghava/toxinpred/) and AlgPred (http://crdd.osdd.net/raghava//algpred/) [,]. In addition, the antithrombotic activity of the peptides was assessed using molecular docking. Molecular docking of the estimated antithrombotic p […]

library_books

A novel B and helper T cell epitopes based prophylactic vaccine against Echinococcus granulosus

2017
PMCID: 5915707
PMID: 29713601
DOI: 10.15171/bi.2018.06

[…] In AlgPred server, the prediction score of SVMc method based on amino acid composition (threshold= -0.4) and dipeptide composition (threshold= -0.2) was found to be about -0.696 and -0.419, respectively. […]


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AlgPred institution(s)
Bioinformatics Centre, Institute of Microbial Technology, Chandigarh, India

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