AlignGraph specifications


Unique identifier OMICS_09047
Name AlignGraph
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Paired-end DNA reads in FASTA format, de novo contigs or scaffolds assembled by any de novo DNA-seq assembler, reference genome from a closely related species
Operating system Unix/Linux
License Artistic License version 2.0
Computer skills Advanced
Stability Stable
Requirements Aligners Bowtie, BLAT
Maintained Yes


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  • person_outline Thomas Girke <>

Publication for AlignGraph

AlignGraph institution(s)
Department of Computer Science and Engineering; Department of Botany and Plant Sciences, University of California, Riverside, CA, USA

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