Alview specifications

Unique identifier:
OMICS_10692
Software type:
Package/Module
Restrictions to use:
None
Output data:
Outputs are visualizations of these aligned short reads.
Programming languages:
C
Stability:
Stable
Name:
Alignment Viewer
Interface:
Command line interface
Input data:
Inputs are files of short-read sequences aligned to a reference genome in the SAM/BAM format and files containing reference genome data.
Operating system:
Unix/Linux, Mac OS, Windows
Computer skills:
Advanced
Maintained:
Yes

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Alview specifications

Unique identifier:
OMICS_10692
Interface:
Web user interface
Input data:
Inputs are files of short-read sequences aligned to a reference genome in the SAM/BAM format and files containing reference genome data.
Programming languages:
C
Stability:
Stable
Name:
Alignment Viewer
Restrictions to use:
None
Output data:
Outputs are visualizations of these aligned short reads.
Computer skills:
Basic
Maintained:
Yes

Alview support

Documentation

Maintainer

  • Richard Finney <>
  • Richard Finney <>

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Credits

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Publications

Institution(s)

Computational Genomics Research Group, Center for Bioinformatics and Information Technology, National Cancer Institute, Bethesda, MD, USA

Funding source(s)

This study is supported by the NCI of the U.S. National Institutes of Health.

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