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Aligns Nucleic Acid Conserved Elements AlignACE

Online

A Gibbs sampling algorithm for identifying motifs that are over-represented in a set of DNA sequences. When used to search upstream of apparently coregulated genes, AlignACE finds motifs that often correspond to the DNA binding preferences of transcription factors.

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AlignACE forum

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AlignACE classification

  • Fungi
    • Saccharomyces cerevisiae

AlignACE specifications

Software type:
Package/Module
Restrictions to use:
None
Computer skills:
Advanced
Maintained:
Yes
Interface:
Command line interface
Operating system:
Unix/Linux
Stability:
Stable

AlignACE distribution

versioning

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No versioning.

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AlignACE forum

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No open topic.

AlignACE classification

  • Fungi
    • Saccharomyces cerevisiae

AlignACE specifications

Interface:
Web user interface
Computer skills:
Basic
Maintained:
Yes
Restrictions to use:
None
Stability:
Stable

AlignACE distribution

Credits

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Publications

Institution(s)

Harvard University Graduate Biophysics Program, Boston, MA, USA; Harvard Medical School Department of Genetics, Boston, MA, USA

Link to literature

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