ALLMAPS specifications

Information


Unique identifier OMICS_07415
Name ALLMAPS
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
Stability Stable
Maintained Yes

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Documentation


Maintainer


  • person_outline Haibao Tang <>

Information


Unique identifier OMICS_07415
Name ALLMAPS
Interface Web user interface
Restrictions to use None
Programming languages Python
Computer skills Basic
Stability Stable
Maintained Yes

Documentation


Maintainer


  • person_outline Haibao Tang <>

ALLMAPS article

ALLMAPS citation

2017
PMCID: 5240624

[…] proteins from the two species. we identified gene pairs that we were able to use for anchoring. the final pseudomolecule assembly was generated from the genetic map and synteny evidence using allmaps64, where higher weighting was given to evidence from the genetic map. the macrosynteny between b. vulgaris and a. lyrata was compared by anchoring the genetic markers to the a. lyrata genome […]

ALLMAPS institution(s)
Center for Genomics and Biotechnology, Fujian Agriculture and Forestry University, Fuzhou, Fujian Province, China; School of Plant Sciences, iPlant Collaborative, University of Arizona, Tucson, AZ, USA, IA, USA; J Craig Venter Institute, Chinakville, MD, USA; Department of Agronomy and Horticulture, University of Nebraska, Lincoln, NE, USA, Ames, IA, USA; Department of Agronomy, Iowa State University, Ames, IA, USA; Heilongjiang River Fisheries Research Institute, Harbin, China

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