AlloPathFinder statistics

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Citations per year

Number of citations per year for the bioinformatics software tool AlloPathFinder

Tool usage distribution map

This map represents all the scientific publications referring to AlloPathFinder per scientific context
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AlloPathFinder specifications


Unique identifier OMICS_07969
Name AlloPathFinder
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Windows
Computer skills Advanced
Stability Stable
Maintained Yes


No version available


  • person_outline Jeanette P. Schmidt

Publication for AlloPathFinder

AlloPathFinder citation


Dependence of prevalence of contiguous pathways in proteins on structural complexity

PLoS One
PMCID: 5726733
PMID: 29232711
DOI: 10.1371/journal.pone.0188616

[…] tworks, and have recently reported a comprehensive database of their results on most all structures in the PDB [,]. An alternate means of identifying pathways has been presented with the algorithm in allopathfinder that predicts pathways of residues on the basis of distance constraints between contiguous residues and evolutionary data []. While these methods have been successful in generating netw […]

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AlloPathFinder institution(s)
Department of Bioengineering, Stanford University, Stanford, CA, USA

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