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AlloPathFinder specifications


Unique identifier OMICS_07969
Name AlloPathFinder
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Windows
Computer skills Advanced
Stability Stable
Maintained Yes


No version available


  • person_outline Jeanette P. Schmidt

Publication for AlloPathFinder

AlloPathFinder citation


Dependence of prevalence of contiguous pathways in proteins on structural complexity

PLoS One
PMCID: 5726733
PMID: 29232711
DOI: 10.1371/journal.pone.0188616

[…] tworks, and have recently reported a comprehensive database of their results on most all structures in the PDB [,]. An alternate means of identifying pathways has been presented with the algorithm in allopathfinder that predicts pathways of residues on the basis of distance constraints between contiguous residues and evolutionary data []. While these methods have been successful in generating netw […]

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AlloPathFinder institution(s)
Department of Bioengineering, Stanford University, Stanford, CA, USA

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