ALN specifications

Unique identifier:
OMICS_21218
Restrictions to use:
None
Stability:
Stable
Maintained:
Yes
Interface:
Web user interface
Computer skills:
Basic
Source code URL:
http://www.genome.ist.i.kyoto-u.ac.jp/~aln_user/archive/prraln.3.4.5.tar.gz

ALN specifications

Unique identifier:
OMICS_21218
Interface:
Command line interface
Input data:
A single nucleotide sequence (SN), a single amino acid sequence (SA), a pre-aligned group of nucleotide sequences (MN), and a group of amino acid sequences (MA).
Operating system:
Unix/Linux
Computer skills:
Advanced
Stability:
Stable
Software type:
Application/Script
Restrictions to use:
None
Input format:
(FASTA, GenBank, EMBL, SwissProt, PIR) + (ProDB, TXT)
Programming languages:
C, C++
Version:
4.1.0
Maintained:
Yes

versioning

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ALN distribution

download

ALN support

Maintainer

Additional information

http://www.genome.ist.i.kyoto-u.ac.jp/~aln_user/aln/aln_tut.html

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Credits

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Publications

Institution(s)

Computational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST), Tokyo, Japan; Department of Computational Biology, Graduate School of Frontier Sciences, The University of Tokyo, Chiba, Japan; Department of Microbiology, Immunology and Biochemistry, University of Tennessee Health Science Center, Memphis, TN, USA

Funding source(s)

Supported by the National Science Foundation [IOS-1242275 and subaward (No.9000009989)] and JSPS KAKENHI B [Grant Number 22310124].

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