ALN specifications

Information


Unique identifier OMICS_21218
Name ALN
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Source code URL http://www.genome.ist.i.kyoto-u.ac.jp/~aln_user/archive/prraln.3.4.5.tar.gz
Maintained Yes

Maintainer


Additional information


http://www.genome.ist.i.kyoto-u.ac.jp/~aln_user/aln/aln_tut.html

Information


Unique identifier OMICS_21218
Name ALN
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input data A single nucleotide sequence (SN), a single amino acid sequence (SA), a pre-aligned group of nucleotide sequences (MN), and a group of amino acid sequences (MA).
Input format (FASTA, GenBank, EMBL, SwissProt, PIR) + (ProDB, TXT)
Operating system Unix/Linux
Programming languages C, C++
Computer skills Advanced
Version 4.1.0
Stability Stable
Maintained Yes

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Maintainer


Additional information


http://www.genome.ist.i.kyoto-u.ac.jp/~aln_user/aln/aln_tut.html

Publication for ALN

ALN institution(s)
Computational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST), Tokyo, Japan; Department of Computational Biology, Graduate School of Frontier Sciences, The University of Tokyo, Chiba, Japan; Department of Microbiology, Immunology and Biochemistry, University of Tennessee Health Science Center, Memphis, TN, USA
ALN funding source(s)
Supported by the National Science Foundation [IOS-1242275 and subaward (No.9000009989)] and JSPS KAKENHI B [Grant Number 22310124].

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