Alt Event Finder specifications

Information


Unique identifier OMICS_01941
Name Alt Event Finder
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input format GTF,BED
Output data A list of alternative splicing events.
Output format GFF3
Operating system Unix/Linux
Programming languages Perl, R
Database management system SQLite
Computer skills Advanced
Version 0.1
Stability Stable
Requirements DBD SQLite
Maintained Yes

Download


Versioning


Add your version

Maintainer


  • person_outline Yunlong Liu <>

Alt Event Finder article

Alt Event Finder institution(s)
Bioinformatics Program, School of Informatics, Indiana University Purdue University Indianapolis, Indianapolis, IN, USA; Center for Computational Biology and Bioinformatics, Indiana University School of Medicine, Indianapolis, IN, USA; Center for Medical Genomics, Indiana University School of Medicine, Indianapolis, IN, USA; Department of Medical and Molecular Genetics, Indiana University School of Medicine, Indianapolis, IN, USA; Department of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, IN, USA; Division of Clinical Pharmacology, Department of Medicine, Indiana University School of Medicine, Indianapolis, IN, USA
Alt Event Finder funding source(s)
Supported by supported by the grants from the National Institutes of Health AA017941, CA113001, GM085121, and GM088076.

Alt Event Finder reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review Alt Event Finder