Main logo
?
tutorial arrow
×
Create your own tool library
Bookmark tools and put favorites into folders to find them easily.

AmiGO | Online access to ontology and annotation data

Online

Provides a set of tools for searching and browsing the Gene Ontology (GO) database. AMIGO visualizes speciation, duplication and horizontal gene transfer events, sequence alignments and descriptive data and external links for both proteins and annotations. The workflow annotation is a two-step process: (i) curators create a model of evolution that is consistent with the observed experimental annotations of modern-day sequences. Once constructed, this model is used in a (ii) step to create inferred annotations over the entire tree. This search box was designed to involve strict selection of terms, which results in coherent annotations within proteins families, as well as across families implicated in a single process.

User report

tutorial arrow
×
Vote up tools and offer feedback
Give value to tools and make your expertise visible
Give your feedback on this tool
Sign up for free to join and share with the community

0 user reviews

star_border star_border star_border star_border star_border
star star star star star

0 user reviews

star_border star_border star_border star_border star_border
star star star star star

No review has been posted.

AmiGO forum

tutorial arrow
×
Communicate with other users
Participate in the forum to get support for using tools. Ask questions about technical specifications.
Take part in the discussion
Sign up for free to ask question and share your advices

No open topic.

AmiGO classification

AmiGO specifications

Unique identifier:
OMICS_02266
Restrictions to use:
None
Computer skills:
Basic
Stability:
Stable
Interface:
Web user interface
Programming languages:
Javascript
Version:
2.4.24
Maintained:
Yes

AmiGO support

Documentation

Maintainer

  • Seth Carbon <>

Credits

tutorial arrow
×
Promote your skills
Define all the tasks you managed and assign your profile the appropriate badges. Become an active member.
Promote your work
Sign up for free to badge your contributorship

Publications

Institution(s)

CALIPHO group, SIB Swiss Institute of Bioinformatics, Centre Medical Universitaire, Geneva, Switzerland; Division of Bioinformatics, Department of Preventive Medicine, Keck School of Medicine of USC, University of Southern California, Los Angeles, CA, USA; Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA, USA

Funding source(s)

National Institutes of Health/National Human Genome Research Institute grant [HG002273].

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.