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Amino acid repeat databases | Protein sequence analysis

An estimated 25% of all eukaryotic proteins contain repeats, which underlines the importance of duplication for evolving new protein functions. Internal repeats often correspond to structural or functional units in proteins. Methods capable of…
RepeatsDB
Dataset

RepeatsDB

Provides annotated tandem repeat protein structures. RepeatsDB includes high…

Provides annotated tandem repeat protein structures. RepeatsDB includes high quality annotations for ∼5400 protein structures. RepeatsDB features information on start and end positions for the…

Prokaryotic…
Dataset

Prokaryotic AARS Database

Analyzes data from thousands of prokaryotic genomes in order to understand what…

Analyzes data from thousands of prokaryotic genomes in order to understand what drives the evolution and diversity of this superfamily. The Prokaryotic AARS Database is an online resource that was…

PolyQ
Dataset

PolyQ

Supplies a set of all currently known human polyQ repeat-containing proteins.…

Supplies a set of all currently known human polyQ repeat-containing proteins. PolyQ provides basic information for each entry, it lacks in both depth and breadth of annotation as well as…

RepSeq
Dataset

RepSeq

A database of amino acid repeat-containing proteins found in lower eukaryotic…

A database of amino acid repeat-containing proteins found in lower eukaryotic pathogens. The RepSeq database is accessed via a web-based application which also provides links to related online tools…

RCPdb
Dataset

RCPdb

A Web site for analysis of the genes encoding homopeptides. RCPdb allows…

A Web site for analysis of the genes encoding homopeptides. RCPdb allows investigators to easily search for, compare, and contrast repeat-containing proteins (RCPs) from 13 different species.…

ProRepeat
Dataset

ProRepeat

Concerns protein repeat sequences. ProRepeat is an online library gathering the…

Concerns protein repeat sequences. ProRepeat is an online library gathering the corresponding nucleotide sequences of the repeat fragments for the purpose of codon usage analysis. It provides the…

COPASAAR
Dataset

COPASAAR

A tool to facilitate the rapid analysis of single amino acid repeats at a…

A tool to facilitate the rapid analysis of single amino acid repeats at a proteome level. The database aims to simplify the comparison of repeat distributions between proteomes in order to provide a…

ProtRepeatsDB
Dataset

ProtRepeatsDB

A multi-organism database of different types of amino acid repeats present in…

A multi-organism database of different types of amino acid repeats present in proteins. ProtRepeatsDB integrates useful tools to perform genome wide queries for rapid screening and identification of…

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