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Amino acid repeat prediction software tools | Protein sequence data analysis

An estimated 25% of all eukaryotic proteins contain repeats, which underlines the importance of duplication for evolving new protein functions. Internal repeats often correspond to structural or functional units in proteins. Methods capable of identifying diverged repeated segments or domains at the sequence level can therefore assist in predicting domain structures, inferring hypotheses about function and mechanism, and investigating the evolution of proteins from smaller fragments.

Source text:
(Biegert and Soding 2008) De novo identification of highly diverged protein repeats by probabilistic consistency. Bioinformatics.

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