AMP specifications

Information


Unique identifier OMICS_02125
Name AMP
Alternative name Automated Microarray Pipeline
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability No
Maintained No

AMP citations

 (2)
library_books

Kidins220/ARMS is expressed in neuroblastoma tumors and stabilizes neurotrophic signaling in a human neuroblastoma cell line

2013
PMCID: 3968798
PMID: 23999075
DOI: 10.1038/pr.2013.146

[…] isolated from adrenal tumors. Data was accessed in the caArray database which is part of the caBIG project (National Cancer Institute, Bethesda, MD). Normalization of the dataset was done through the Automated Microarray Pipeline using Robust Multiarray Averaging (RMA) (Dana-Farber Cancer Institute, Boston, MA). The open source MeV experiment viewer (Dana-Farber Cancer Institute) was used to analy […]

library_books

Examining smoking induced differential gene expression changes in buccal mucosa

2010
BMC Med Genomics
PMCID: 3161387
PMID: 20576139
DOI: 10.1186/1755-8794-3-24

[…] Array data were processed with Robust Multiarray Average (RMA) [] and quantile normalized using the package available at the Automated Microarray Pipeline (AMP) []. Differential expression analysis comparing smokers to nonsmokers was performed with both Significance Analysis of Microarrays (SAM) [] and Rank Product Analysis […]

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