AmphipaSeek protocols

AmphipaSeek specifications

Information


Unique identifier OMICS_17720
Name AmphipaSeek
Alternative name AMPHIPATHIC IN-PLANE MEMBRANE ANCHORS PREDICTION
Interface Web user interface
Restrictions to use None
Programming languages C, Python
Computer skills Basic
Stability Stable
Maintained Yes

Publication for AMPHIPATHIC IN-PLANE MEMBRANE ANCHORS PREDICTION

AmphipaSeek IN pipeline

2016
PMCID: 4905992
PMID: 26817670
DOI: 10.1002/mbo3.337

[…] str. k‐12 substr. mg1655; taxid: 511145). specific strains of clostridia were selected based on the availability of their whole genome sequence. the positions amphipatic helices were predicted using amphipaseek (sapay et al. 2006). multiple alignment of protein sequences was done using clustalw plugin of clc sequence viewer 7.6 software (clc bio, cambridge, ma)., our first question to address […]

AmphipaSeek institution(s)
Institut de Biologie et Chimie des Protéines, CNRS-Univ. Lyon 1 – IFR128 BioSciences Lyon-Gerland, Lyon, France; LORIA-CNRS, Campus Scientifique, Vandœuvre-lès-Nancy, France

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