AmpliSAT specifications

Unique identifier:
OMICS_10988
Software type:
Toolkit/Suite
Restrictions to use:
None
Input format:
FASTQ/FASTA
Output format:
Excel file, FASTA files
Programming languages:
Javascript, Perl
Computer skills:
Basic
Maintained:
Yes
Name:
Amplicon Sequencing Analysis Tools
Interface:
Web user interface
Input data:
Reads
Output data:
Analysis results
Biological technology:
Illumina, Life Technologies, Roche
Parallelization:
Other
Stability:
Stable

Subtools

  • AmpliMERGE
  • AmpliCLEAN
  • AmpliMIX
  • AmpliCHECK
  • AmpliSAS
  • AmpliLEGACY
  • AmpliCOMPARE
  • AmpliCOMBINE
  • AmpliSIM
  • AmpliTCR
  • AmpliCDR3
  • AmpliHLA
  • AmpliTAXO
  • AmpliCANCER

AmpliSAT specifications

Unique identifier:
OMICS_10988
Software type:
Toolkit/Suite
Restrictions to use:
None
Operating system:
Unix/Linux
Parallelization:
Other
Stability:
Stable
Name:
Amplicon Sequencing Analysis Tools
Interface:
Command line interface
Biological technology:
Illumina, Life Technologies, Roche
Programming languages:
Javascript, Perl
Computer skills:
Advanced
Maintained:
Yes

Subtools

  • AmpliMERGE
  • AmpliCLEAN
  • AmpliMIX
  • AmpliCHECK
  • AmpliSAS
  • AmpliLEGACY
  • AmpliCOMPARE
  • AmpliCOMBINE
  • AmpliSIM
  • AmpliTCR
  • AmpliCDR3
  • AmpliHLA
  • AmpliTAXO
  • AmpliCANCER

versioning

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AmpliSAT distribution

download

AmpliSAT support

Documentation

Maintainer

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Credits

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Publications

Institution(s)

Evolutionary Biology Group, Faculty of Biology, Adam Mickiewicz University, Poznan, Poland

Funding source(s)

Supported by MAESTRO grant UMO-2013/08/A/NZ8/00153 from National Science Centre.

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