AmpliSAT specifications

Information


Unique identifier OMICS_10988
Name AmpliSAT
Alternative name Amplicon Sequencing Analysis Tools
Software type Toolkit/Suite
Interface Web user interface
Restrictions to use None
Input data Reads
Input format FASTQ/FASTA
Output data Analysis results
Output format Excel file, FASTA files
Biological technology Illumina, Life Technologies, Roche
Programming languages Javascript, Perl
Parallelization Other
Computer skills Basic
Stability Stable
Maintained Yes

Subtools


  • AmpliMERGE
  • AmpliCLEAN
  • AmpliMIX
  • AmpliCHECK
  • AmpliSAS
  • AmpliLEGACY
  • AmpliCOMPARE
  • AmpliCOMBINE
  • AmpliSIM
  • AmpliTCR
  • AmpliCDR3
  • AmpliHLA
  • AmpliTAXO
  • AmpliCANCER

Documentation


Maintainer


Information


Unique identifier OMICS_10988
Name AmpliSAT
Alternative name Amplicon Sequencing Analysis Tools
Software type Toolkit/Suite
Interface Command line interface
Restrictions to use None
Biological technology Illumina, Life Technologies, Roche
Operating system Unix/Linux
Programming languages Javascript, Perl
Parallelization Other
Computer skills Advanced
Stability Stable
Maintained Yes

Subtools


  • AmpliMERGE
  • AmpliCLEAN
  • AmpliMIX
  • AmpliCHECK
  • AmpliSAS
  • AmpliLEGACY
  • AmpliCOMPARE
  • AmpliCOMBINE
  • AmpliSIM
  • AmpliTCR
  • AmpliCDR3
  • AmpliHLA
  • AmpliTAXO
  • AmpliCANCER

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Documentation


Maintainer


AmpliSAT article

AmpliSAT institution(s)
Evolutionary Biology Group, Faculty of Biology, Adam Mickiewicz University, Poznan, Poland
AmpliSAT funding source(s)
Supported by MAESTRO grant UMO-2013/08/A/NZ8/00153 from National Science Centre.

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