Amplicon sequencing data analysis software tools

Because of its low cost, amplicon sequencing, also known as ultra-deep targeted sequencing, is now becoming widely used in oncology for detection of actionable mutations, i.e. mutations influencing cell sensitivity to targeted therapies.

Source text:
(Boevaet al., 2014) Multi-factor data normalization enables the detection of copy number aberrations in amplicon sequencing data. Bioinformatics.

Data preprocessing

Data processing

Data analysis

Sequence alignment

Genome variant analysis

Protein sequence/Expression



File manipulation

Unclassified tools