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An open source, semi-automatic analysis pipeline and visualization tool for Infinium HumanMethylation450 Assays with a focus on ease of use. ADMIRE features arbitrary experimental settings, quality control, automatic filtering, normalization, multiple testing, differential analyses on arbitrary genomic regions. Paper ready graphics, genome browser tracks and table outputs include summary data and statistics, allowing the fast comparison of methylation profiles between sample groups and the exploration of methylation patterns along the whole genome. The web based version of ADMIRE provides a simple interface to researchers with limited programming skills, whereas the offline version is suitable for integration into custom pipelines.

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ADMIRE versioning

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ADMIRE classification

ADMIRE specifications

Software type:
Pipeline/Workflow
Restrictions to use:
None
Output data:
Tables and graphs
Operating system:
Unix/Linux
Computer skills:
Advanced
Stability:
Stable
Interface:
Command line interface
Input data:
Infinium Human Methylation450K Assay
Biological technology:
Illumina
Programming languages:
Perl, R
Version:
1.0
Maintained:
Yes

User report

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Vote up tools and offer feedback
Give value to tools and make your expertise visible

0 user reviews

0 user reviews

No review has been posted.

ADMIRE forum

×
Communicate with other users
Participate in the forum to get support for using tools. Ask questions about technical specifications.

No open topic.

ADMIRE classification

ADMIRE specifications

Interface:
Web user interface
Input data:
Infinium Human Methylation450K Assay
Biological technology:
Illumina
Computer skills:
Basic
Stability:
Stable
Restrictions to use:
None
Output data:
Tables and graphs
Programming languages:
Perl, R
Version:
1.0
Maintained:
Yes

ADMIRE support

Maintainer

  • Jens Preussner <>

Credits

Institution(s)

Max Planck Institute for Heart and Lung Research, Germany

Funding source(s)

ECCPS

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