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Number of citations per year for the bioinformatics software tool Analyst TF
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Protocols

Analyst TF specifications

Information


Unique identifier OMICS_33686
Name Analyst TF
Alternative name Analyst
Software type Application/Script
Interface Command line interface
Restrictions to use Academic or non-commercial use
Operating system Unix/Linux
License Commercial
Computer skills Advanced
Stability Stable
Registration required Yes
Maintained Yes

Versioning


No version available

Analyst TF citations

 (149)
library_books

Chemical fingerprints of cold physical plasmas – an experimental and computational study using cysteine as tracer compound

2018
Sci Rep
PMCID: 5955931
PMID: 29769633
DOI: 10.1038/s41598-018-25937-0

[…] High-resolution MS data were collected using a TripleTOF5600 system with Analyst TF 1.51 software (both Sciex). The treated samples were diluted with 40% methanol containing 0.05% ammonia, and directly infused (10 µl/min) into the systems turbo ion source using negative el […]

library_books

Elucidation of inhibitory effects on metastatic sentinel lymph nodes of breast cancer during One Step Nucleic Acid Amplification

2018
Sci Rep
PMCID: 5954024
PMID: 29765119
DOI: 10.1038/s41598-018-25911-w

[…] kit (Thermo Scientific, IL). Each fraction was dried with a vacuum centrifuge concentrator and dissolved in 0.1% TFA. Mass spectrometric analysis was performed with the Triple TOF 5600 operated with Analyst TF 1.7 software (AB Sciex). The Triple TOF 5600 was connected to a Eksigent nano LC system with attached nano cHiPLC trap column chrom XP C18-CL (200 μm × 0.5 mm) and nano cHiPLC column chrom […]

library_books

Simultaneous quantification of serum monounsaturated and polyunsaturated phosphatidylcholines as potential biomarkers for diagnosing non small cell lung cancer

2018
Sci Rep
PMCID: 5940703
PMID: 29740076
DOI: 10.1038/s41598-018-25552-z

[…] into the following four segments: 50–300 Da, 290–600 Da, 590–900 Da, and 890–1200 Da. Data acquisition and processing were performed with Mass Hunter (version B.05.01, Agilent Technologies, USA) and Analyst TF (version 1.7.1, AB SCIEX, USA) qualitative analysis software. MS raw data files were converted to the mzXML format using ProteoWizard and processed by the R package XCMS (version 1.41.0), w […]

library_books

The Apoplastic Secretome of Trichoderma virens During Interaction With Maize Roots Shows an Inhibition of Plant Defence and Scavenging Oxidative Stress Secreted Proteins

2018
Front Plant Sci
PMCID: 5896443
PMID: 29675028
DOI: 10.3389/fpls.2018.00409

[…] 150 ms, followed by 40 ms. MS/MS scans on the 40 most abundant multiply-charged peptides (m/z 80–1600) for a total cycle time of 1.8 s. The mass spectrometer and HPLC system were under the control of Analyst TF 1.7 software (Sciex, USA).The MS data were searched against a database which combined the Uniprot proteomes from Z. mays (http://www.uniprot.org/proteomes/UP000007305) and T. virens Gv29.8 […]

library_books

Integrative proteomics in prostate cancer uncovers robustness against genomic and transcriptomic aberrations during disease progression

2018
Nat Commun
PMCID: 5862881
PMID: 29563510
DOI: 10.1038/s41467-018-03573-6

[…] alysis were: ion spray voltage floating (ISVF) 2300 V, curtain gas (CUR) 30, interface heater temperature (IHT)+125 °C, ion source gas 1 13, declustering potential (DP) 100 V. All methods were run by Analyst TF 1.5 software (Ab Sciex, USA). For IDA parameters, 0.25 s MS survey scan in the mass range 350–1250 mz were followed by 60 MS/MS scans in the mass range of 100–1500 Da (total cycle time 3.30 […]

library_books

A chemoenzymatic process for amide bond formation by an adenylating enzyme mediated mechanism

2018
Sci Rep
PMCID: 5811625
PMID: 29440726
DOI: 10.1038/s41598-018-21408-8

[…] pray voltage floating, 5.5 kV; declustering potential, 80 V; source temperature, 0 °C; desolvation temperature, 500 °C; ion source gas 2, 20 psi; collision energy, 30 V. The data were collected using Analyst TF 1.6 software (SCIEX). NMR spectra were measured with an AVANCE III spectrometer (Bruker, Billerica, MA). For 1H NMR and 13C NMR analysis, the compounds dissolved in D2O containing trimethyl […]


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Analyst TF institution(s)
SCIEX, Framingham, MA, USA

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