anamiR

Identify potential interactions of miRNA-target gene interactions from miRNA and mRNA expression data. AnamiR contains functions for statistical test, databases of miRNA-target gene interaction and functional analysis. The anamiR package provides a whole workflow, which contains important functions like “normalization” used to normalize the expression data with one of three methods, including normal, quantile, rank.invariant, “differExp_discrete” used to find the differential genes or miRNAs from given expression data with one of three statistical methods, including t.test, wilcox. test,limma and DESeq or “miR_converter” to convert the older miRNA annotation to the miRBase 21 version.