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Ancora specifications

Information


Unique identifier OMICS_09643
Name Ancora
Restrictions to use None
Maintained Yes

Maintainer


  • person_outline Ge Tan

Publication for Ancora

Ancora citations

 (9)
call_split

Topologically associating domains are ancient features that coincide with Metazoan clusters of extreme noncoding conservation

2017
Nat Commun
PMCID: 5585340
PMID: 28874668
DOI: 10.1038/s41467-017-00524-5
call_split See protocol

[…] ur locations in vertebrates. The resulting set of CNEs was then smoothed using a sliding window (300 kb for vertebrates and 50 kb for Drosophila) to generate CNE densities, as was originally used for ANCORA browser. As the evolutionary distance between two species increases it becomes more difficult to identify CNEs, and therefore it is required that less stringent thresholds are used. […]

library_books

A new view on the morphology and phylogeny of eugregarines suggested by the evidence from the gregarine Ancora sagittata (Leuckart, 1860) Labbé, 1899 (Apicomplexa: Eugregarinida)

2017
PeerJ
PMCID: 5452951
PMID: 28584702
DOI: 10.7717/peerj.3354

[…] . Representatives of heterokonts and rhizarians were used as outgroups. The final analysis included 114 representative sequences (1,570 aligned sites).To analyse sequences that are closely related to Ancora sagittata, including environmental entries (from GenBank), we prepared the SSU rDNA alignment of 52 sequences for 1,709 sites; only one sequence was included for each of four clusters of near-i […]

call_split

Resurrecting a subgenus to genus: molecular phylogeny of Euphyllia and Fimbriaphyllia (order Scleractinia; family Euphyllidae; clade V)

2017
PeerJ
PMCID: 5719963
PMID: 29226032
DOI: 10.7717/peerj.4074
call_split See protocol

[…] with the clones of the β-tubulin gene. Sequences of a gene were then aligned using the CLUSTAL W plug-in of the software MEGA 5 (). Cytb and cox1 segments from the complete mitochondrial genome of E. ancora (GenBank accession nos. NC015641 (cytb) and JF825139 (cox1); ) were used to guide the mitochondrial gene alignments. Available sequences of E. glabrescens, E. ancora, E. divisa, G. fascicularis […]

library_books

Genomic Survey of a Hyperparasitic Microsporidian Amphiamblys sp. (Metchnikovellidae)

2016
Genome Biol Evol
PMCID: 5381614
PMID: 27694476
DOI: 10.1093/gbe/evw235

[…] To investigate genomic data, the DNA sample of Ancora sagittata WSBS2006 containing metchnikovellid identified as Amphiamblys sp. was prepared for sequencing by performing total DNA amplification. The amplified sample was sequenced on the Illumina […]

library_books

Arsenic Speciation in Fish Products and Seafood as a Prerequisite for Proper Risk Assessment

2015
PMCID: 5076625
PMID: 27800381
DOI: 10.4081/ijfs.2015.4577

[…] , per i confronti temporali è stato utilizzato il test non parametrico di Kruskal-Wallis (o One-Way ANOVA by Ranks) e per i confronti tra gruppi di organismi marini (per habitat e per taxon) il test, ancora non parametrico, di Mann-Witney (o Wilcoxon Rank-Sum test). […]

library_books

Bad air, amulets and mosquitoes: 2,000 years of changing perspectives on malaria

2013
Malar J
PMCID: 3723432
PMID: 23835014
DOI: 10.1186/1475-2875-12-232

[…] tile e necessario a ridurre lo esercito, e massimamente essendo affaticato per la infermità e per la mala ariae per lungo e difficile campeggiare nel tempo dell'autunno e in luoghi infermi, e vedendo ancora ch'egli era diminuito assai per la licenza conceduta a molti pel capitano di potersi partire: perocchè, nel tempo che eglino erano stati lungamente a quello assedio, molti, o per disagio del ca […]

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Ancora institution(s)
Computational Biology Unit, Bergen Center for Computational Science, University of Bergen, Thormøhlensgate, Bergen, Norway; Sars Centre for Marine Molecular Biology, University of Bergen, Bergen, Norway; Programme for Genomics and Bioinformatics, Department of Cell and Molecular Biology, Karolinska Institutet, Stockholm, Sweden

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