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Animal Quantitative Trait Loci database Animal QTLdb

Online

Provides quantitative trait loci (QTL) data for cattle, chicken and pigs. AnimalQTLdb enables comparison of QTL results within species and across experiments. It serves as a bridge between genotypes (genes) and phenotypes (traits), which will inevitably necessitate inclusion of single nucleotide polymorphism (SNP)/genome-wide association study (GWAS) data. The database contains about 5900 cattle, 3400 chickens, 7400 pigs, 750 sheep and 90 rainbow trout data points.

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Animal QTLdb classification

  • Animals

Animal QTLdb specifications

Restrictions to use:
None
Community driven:
No
User data submission:
Allowed
Maintained:
Yes
Database management system:
MySQL
Data access:
File download, Browse, Application programming interface
Version:
33.0

Animal QTLdb support

Maintainers

Credits

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Publications

Institution(s)

Department of Animal Science and Center for Integrated Animal Genomics, Iowa State University, Ames, IA, USA; Department of Meat and Animal Science, College of Agriculture and Life Sciences, University of Wisconsin-Madison, Madison, WI, USA

Funding source(s)

Supported by the USDA NRSP-8 National Animal Genome Research Program, Bioinformatics Coordination Project and partly by the USDA-NRI [2007-04187].

Link to literature

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