anNET statistics

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Citations per year

Number of citations per year for the bioinformatics software tool anNET

Tool usage distribution map

This map represents all the scientific publications referring to anNET per scientific context
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Associated diseases


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anNET specifications


Unique identifier OMICS_06494
Name anNET
Software type Package/Module
Interface Command line interface
Restrictions to use Academic or non-commercial use
Operating system Unix/Linux, Mac OS, Windows
Programming languages MATLAB
Computer skills Advanced
Stability Stable
Maintained Yes


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Publication for anNET

anNET citations


Systematic Applications of Metabolomics in Metabolic Engineering

PMCID: 3901235
PMID: 24957776
DOI: 10.3390/metabo2041090
call_split See protocol

[…] method can assess the internal consistency of a metabolomics dataset, predict thermodynamically feasible ranges for unmeasured metabolites, and identify putative sites of transcriptional regulation. anNET is a MATLAB implementation of the algorithm designed to facilitate straightforward application of NET analysis []. NET analysis of a metabolomics dataset for S. cerevisiae revealed a thermodynam […]


Dynamic metabolomics differentiates between carbon and energy starvation in recombinant Saccharomyces cerevisiae fermenting xylose

Biotechnol Biofuels
PMCID: 3462113
PMID: 22587303
DOI: 10.1186/1754-6834-5-34

[…] strain. The final data set consisted of 185 samples and 44 measured metabolites.The thermodynamic feasibility of 38 out of the 44 metabolite ranges measured in the XR/XDH-strain were validated using anNET toolbox []. These 38 metabolites were quantified using external standards. The metabolites that could not be quantified, due to lack of standards, were sedoheptulose 7-phosphate (S7P), acetyl-Co […]

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anNET institution(s)
ETH Zurich, Institute of Molecular Systems Biology, Zurich, Switzerland
anNET funding source(s)
Supported by the ETH Zurich.

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